ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mq0Y1 - ECOD Domain | ECOD

ECOD/Domains/e5mq0Y1

e5mq0Y1

UID: 001945980

PDB

Range: Y:28-111
PDB: 5MQ0 chain Y(all domains)
UniProt: P40567 (all domains)
Gene: MSL1

Molecule: U2 small nuclear ribonucleoprotein B'' (U2 snRNP B'')

3D Structure

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Related Domains

Browse other domains in RRM_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_5(304.9.1.23)

Pfam Families

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

ClanCL0221RRM

External Links

ECOD PDB View: 5MQ0 RCSB PDB: 5MQ0 PDBe: 5MQ0 UniProt: P40567

Downloads

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