ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5wyk3E2 - ECOD Domain | ECOD

ECOD/Domains/e5wyk3E2

e5wyk3E2

UID: 002049750

PDB

Range: 3E:3-18,3E:38-154
PDB: 5WYK chain 3E(all domains)
UniProt: Q12499 (all domains)
Gene: NOP58

Molecule: Nucleolar protein 58 (Nucleolar protein 5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in NOP5NT, Nop5_56-rel_N_Arc →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupNop N-terminal domain(3407)

HH-groupNop N-terminal domain(3407.1)

TT-groupNop N-terminal domain(3407.1.1)

FFamilyNOP5NT, Nop5_56-rel_N_Arc(3407.1.1.4)

Pfam Families

NOP5NT (NUC127) domain

ClanCL0759Nop_N_sf

PF21572Nop5_56-rel_N_Arc

Archaeal Nop5/56-rel, N-terminal domain

ClanCL0759Nop_N_sf

External Links

ECOD PDB View: 5WYK RCSB PDB: 5WYK PDBe: 5WYK UniProt: Q12499

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure