ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nirB1 - ECOD Domain | ECOD

ECOD/Domains/e5nirB1

e5nirB1

UID: 002083003

PDB

Range: B:30-95
PDB: 5NIR chain B(all domains)
UniProt: P02458 (all domains)
Gene: COL2A1

Molecule: Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupFibronectin type I module-like(391)

HH-groupFibronectin type I module-like(391.1)

TT-groupVWC domain-related(391.1.2)

FFamilyVWC(391.1.2.1)

Pfam Families

von Willebrand factor type C domain

ClanCL0451FnI-like

External Links

ECOD PDB View: 5NIR RCSB PDB: 5NIR PDBe: 5NIR UniProt: P02458

Downloads

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