ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5mdxE1 - ECOD Domain | ECOD

ECOD/Domains/e5mdxE1

e5mdxE1

UID: 002084623

PDB

Range: E:10-81
PDB: 5MDX chain E(all domains)
UniProt: P56779 (all domains)
Gene: psbE

Molecule: Cytochrome b559 subunit alpha (PSII reaction center subunit V)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cytochrom_B559,Cytochrom_B559a →

Classification

AArchitectureextended segments(a.20)

XX-groupCytochrome b559 subunits(5036)

HH-groupCytochrome b559 subunits(5036.1)

TT-groupCytochrome b559 subunits(5036.1.1)

FFamilyCytochrom_B559,Cytochrom_B559a(5036.1.1.2)

Pfam Families

PF00283Cytochrom_B559

Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits

PF00284Cytochrom_B559a

Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit

External Links

ECOD PDB View: 5MDX RCSB PDB: 5MDX PDBe: 5MDX UniProt: P56779

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure