ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k8xA1 - ECOD Domain | ECOD

ECOD/Domains/e5k8xA1

e5k8xA1

UID: 002086965

PDB

Range: A:290-478
PDB: 5K8X chain A(all domains)
UniProt: Q9WVG6 (all domains)
Gene: Carm1

Molecule: Histone-arginine methyltransferase CARM1

3D Structure

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Related Domains

Browse other domains in PRMT_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupArginine methyltransferase oligomerization subdomain(3698)

HH-groupArginine methyltransferase oligomerization subdomain(3698.1)

TT-groupArginine methyltransferase oligomerization subdomain(3698.1.1)

FFamilyPRMT_C(3698.1.1.2)

Ligands

in contact, ≤ 4 Å

[[[(~{E})-3-[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]prop-2-enyl]amino]-azanyl-methylidene]azanium6ZH

+ 4 additives (1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, …)

1,2-ETHANEDIOLEDO
3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOLPE8

Pfam Families

Arginine methyltransferase oligomerization subdomain

ClanCL0799PRMT_C

External Links

ECOD PDB View: 5K8X RCSB PDB: 5K8X PDBe: 5K8X UniProt: Q9WVG6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.