ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xjcA2 - ECOD Domain | ECOD

ECOD/Domains/e5xjcA2

e5xjcA2

UID: 002088970

PDB

Range: A:25-810
PDB: 5XJC chain A(all domains)
UniProt: Q6P2Q9 (all domains)
Gene: PRPF8

Molecule: Pre-mRNA-processing-splicing factor 8 (220 kDa U5 snRNP-specific protein) (PRP8 homolog) (Splicing factor Prp8) (p220)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PRO8NT,PROCN →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPre-mRNA-splicing factor 8 N-terminal domain(1038)

HH-groupPre-mRNA-splicing factor 8 N-terminal domain(1038.1)

TT-groupPre-mRNA-splicing factor 8 N-terminal domain(1038.1.1)

FFamilyPRO8NT,PROCN(1038.1.1.1)

Pfam Families

PRO8NT (NUC069), PrP8 N-terminal domain

PROCN (NUC071) domain

External Links

ECOD PDB View: 5XJC RCSB PDB: 5XJC PDBe: 5XJC UniProt: Q6P2Q9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure