ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nifR1 - ECOD Domain | ECOD

ECOD/Domains/e5nifR1

e5nifR1

UID: 002097817

PDB

Range: R:3-243
PDB: 5NIF chain R(all domains)
UniProt: P40303 (all domains)
Gene: PRE6

Molecule: Proteasome subunit alpha type-4 (Macropain subunit PRE6) (Multicatalytic endopeptidase complex subunit PRE6) (Proteasome component PRE6) (Proteinase YSCE subunit PRE6)

3D Structure

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Related Domains

Browse other domains in Proteasome,Proteasome_A_N →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome,Proteasome_A_N(210.1.1.2)

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

PF10584Proteasome_A_N

Proteasome subunit A N-terminal signature

ClanCL0052NTN

External Links

ECOD PDB View: 5NIF RCSB PDB: 5NIF PDBe: 5NIF UniProt: P40303

Downloads

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