ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nifF1 - ECOD Domain | ECOD

ECOD/Domains/e5nifF1

e5nifF1

UID: 002097820

PDB

Range: F:3-234
PDB: 5NIF chain F(all domains)
UniProt: P40302 (all domains)
Gene: PRE5

Molecule: Proteasome subunit alpha type-6 (Macropain subunit PRE5) (Multicatalytic endopeptidase complex subunit PRE5) (Proteasome component PRE5) (Proteinase YSCE subunit PRE5)

3D Structure

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Related Domains

Browse other domains in Proteasome,Proteasome_A_N →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome,Proteasome_A_N(210.1.1.2)

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

PF10584Proteasome_A_N

Proteasome subunit A N-terminal signature

ClanCL0052NTN

External Links

ECOD PDB View: 5NIF RCSB PDB: 5NIF PDBe: 5NIF UniProt: P40302

Downloads

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