ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lkjA1 - ECOD Domain | ECOD

ECOD/Domains/e5lkjA1

e5lkjA1

UID: 002101026

PDB

Range: A:290-496
PDB: 5LKJ chain A(all domains)
UniProt: Q9WVG6 (all domains)
Gene: Carm1

Molecule: Histone-arginine methyltransferase CARM1

3D Structure

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Related Domains

Browse other domains in PRMT_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupArginine methyltransferase oligomerization subdomain(3698)

HH-groupArginine methyltransferase oligomerization subdomain(3698.1)

TT-groupArginine methyltransferase oligomerization subdomain(3698.1.1)

FFamilyPRMT_C(3698.1.1.2)

Ligands

in contact, ≤ 4 Å

1,2-DimethoxyethaneDXE
drugDrugBank DB01749
(2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(2-carbamimidamidoethyl)amino]-2-azanyl-butanoic acid6YB

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

Pfam Families

Arginine methyltransferase oligomerization subdomain

ClanCL0799PRMT_C

External Links

ECOD PDB View: 5LKJ RCSB PDB: 5LKJ PDBe: 5LKJ UniProt: Q9WVG6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.