ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xogC2 - ECOD Domain | ECOD

ECOD/Domains/e5xogC2

e5xogC2

UID: 002101954

PDB

Range: C:4-40,C:173-266
PDB: 5XOG chain C(all domains)
UniProt: C4R7L2 (all domains)
Gene: PAS_chr4_0344

Molecule: DNA-directed RNA polymerase II subunit RPB3

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_L →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L(305.1.1.1)

Pfam Families

PF01193RNA_pol_L

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

ECOD PDB View: 5XOG RCSB PDB: 5XOG PDBe: 5XOG UniProt: C4R7L2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure