ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5okzM1 - ECOD Domain | ECOD

ECOD/Domains/e5okzM1

e5okzM1

UID: 002105519

PDB

Range: M:19-99,M:121-249,M:270-286
PDB: 5OKZ chain M(all domains)
UniProt: P25359 (all domains)
Gene: RRP43

Molecule: Exosome complex component RRP43 (Ribosomal RNA-processing protein 43)

3D Structure

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Related Domains

Browse other domains in RNase_PH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyRNase_PH(212.1.1.10)

Pfam Families

PF01138RNase_PH

3' exoribonuclease family, domain 1

ClanCL0329S5

External Links

ECOD PDB View: 5OKZ RCSB PDB: 5OKZ PDBe: 5OKZ UniProt: P25359

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