ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5okzl3 - ECOD Domain | ECOD

ECOD/Domains/e5okzl3

e5okzl3

UID: 002105572

PDB

Range: l:52-101
PDB: 5OKZ chain l(all domains)
UniProt: P38792 (all domains)
Gene: RRP4

Molecule: Exosome complex component RRP4 (Ribosomal RNA-processing protein 4)

3D Structure

Loading viewer...

Related Domains

Browse other domains in ECR1_N →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupRibosomal L27 protein(325.1.8)

FFamilyECR1_N(325.1.8.2)

Pfam Families

Exosome complex exonuclease RRP4 N-terminal region

ClanCL0105Hybrid

External Links

ECOD PDB View: 5OKZ RCSB PDB: 5OKZ PDBe: 5OKZ UniProt: P38792

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure