ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5oqlE1 - ECOD Domain | ECOD

ECOD/Domains/e5oqlE1

e5oqlE1

UID: 002125177

RepresentativePDB

Range: E:2-196,E:272-409
PDB: 5OQL chain E(all domains)
UniProt: G0S387 (all domains)
Gene: CTHT_0020090

Molecule: U3 snoRNP protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in U3_assoc_6, HAT_Syf1_CNRKL1_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyU3_assoc_6, HAT_Syf1_CNRKL1_N(109.4.1.1630)

Pfam Families

PF08640U3_assoc_6

U3 small nucleolar RNA-associated protein 6

ClanCL0020TPR

PF23233HAT_Syf1_CNRKL1_N

Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

ClanCL0020TPR

External Links

ECOD PDB View: 5OQL RCSB PDB: 5OQL PDBe: 5OQL UniProt: G0S387

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure