ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5oqla1 - ECOD Domain | ECOD

ECOD/Domains/e5oqla1

e5oqla1

UID: 002125197

PDB

Range: a:2-180
PDB: 5OQL chain a(all domains)
UniProt: G0SDL4 (all domains)
Gene: CTHT_0052200

Molecule: U3 small nucleolar ribonucleoprotein protein IMP3 (U3 small nucleolar ribonucleoprotein protein imp3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S4,S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4,S4(221.1.2.1)

Pfam Families

PF00163Ribosomal_S4

Ribosomal protein S4/S9 N-terminal domain

ClanCL0492S4

S4 domain

ClanCL0492S4

External Links

ECOD PDB View: 5OQL RCSB PDB: 5OQL PDBe: 5OQL UniProt: G0SDL4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure