ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5wm8A2 - ECOD Domain | ECOD

ECOD/Domains/e5wm8A2

e5wm8A2

UID: 002133177

PDB

Range: A:377-437
PDB: 5WM8 chain A(all domains)
UniProt: P12689 (all domains)
Gene: REV1

Molecule: DNA repair protein REV1

3D Structure

Loading viewer...

Related Domains

Browse other domains in IMS →

Classification

AArchitecturea+b three layers(a.12)

XX-groupHypothetical protein Ta1206-like(850)

HH-groupHypothetical protein Ta1206-like(850.1)

TT-groupHypothetical protein Ta1206-like(850.1.1)

FFamilyIMS(850.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENEBAP
drugDrugBank DB07435
2'-Deoxycytidine 5'-triphosphateDCP
drugDrugBank DB03258

Pfam Families

impB/mucB/samB family

External Links

ECOD PDB View: 5WM8 RCSB PDB: 5WM8 PDBe: 5WM8 UniProt: P12689

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 3 additives (Glycerin, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.