ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5optR1 - ECOD Domain | ECOD

ECOD/Domains/e5optR1

e5optR1

UID: 002137331

PDB

Range: R:2-82
PDB: 5OPT chain R(all domains)
UniProt: Q4DC38 (all domains)
Gene: Tc00.1047053511291.90

Molecule: 40S ribosomal protein S13, putative

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S13_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-group40S ribosomal protein S13 N-terminal domain(101.40)

TT-group40S ribosomal protein S13 N-terminal domain(101.40.1)

FFamilyRibosomal_S13_N(101.40.1.1)

Pfam Families

PF08069Ribosomal_S13_N

Ribosomal S13/S15 N-terminal domain

External Links

ECOD PDB View: 5OPT RCSB PDB: 5OPT PDBe: 5OPT UniProt: Q4DC38

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure