PDB 5OPT
ELECTRON MICROSCOPY0 chains45 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain bview chain
1 domainChain cview chain
1 domainChain dview chain
3 domainsChain eview chain
2 domainsChain fview chain
1 domainChain gview chain
1 domainChain hview chain
3 domainsChain iview chain
1 domainChain jview chain
1 domainChain kview chain
1 domainChain lview chain
1 domainChain Lview chain
3 domainsChain mview chain
2 domainsChain Mview chain
1 domainChain nview chain
1 domainChain oview chain
1 domainChain Oview chain
1 domainChain pview chain
1 domainChain Pview chain
1 domainChain qview chain
1 domainChain Qview chain
2 domainsChain rview chain
1 domainChain Rview chain
2 domainsChain Sview chain
1 domainChain tview chain
1 domainChain Tview chain
1 domainChain uview chain
1 domainChain Uview chain
1 domainChain Vview chain
1 domainChain Wview chain
2 domainsChain Xview chain
1 domainChain Yview chain
1 domainChain Zview chain
1 domainAll Domains (45)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e5opta1 | a:41-110 | Ribosomal_S25 | 101 → 101.1 → 101.1.2 |
| 2 | b | e5optb1 | b:1-164 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 3 | c | e5optc1 | c:7-66 | Ribosomal_S30 | 3168 → 3168.1 → 3168.1.1 |
| 4 | d | e5optd1 | d:183-259 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 5 | d | e5optd2 | d:37-115 | Ribosomal_S5 | 3274 → 3274.1 → 3274.1.1 |
| 6 | d | e5optd3 | d:116-182 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 7 | e | e5opte1 | e:68-130 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 8 | e | e5opte2 | e:2-67 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 9 | f | e5optf1 | f:4-210 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 10 | g | e5optg1 | g:4-86 | Ribosomal_S21e | 3167 → 3167.1 → 3167.1.1 |
| 11 | h | e5opth1 | h:68-140 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 12 | h | e5opth2 | h:141-220 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 13 | h | e5opth3 | h:221-240 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 14 | i | e5opti1 | i:21-141 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 15 | j | e5optj1 | j:86-149 | Ribosomal_S27 | 375 → 375.1 → 375.1.1 |
| 16 | k | e5optk1 | k:58-175 | Ribosomal_S17e | 101 → 101.1 → 101.1.17 |
| 17 | l | e5optl1 | l:15-113 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 18 | L | e5optL1 | L:114-172 | Ribosomal_S4e | 2 → 2.1 → 2.1.1 |
| 19 | L | e5optL2 | L:2-113 | S4,RS4NT | 221 → 221.1 → 221.1.2 |
| 20 | L | e5optL3 | L:173-259 | KOW,40S_S4_C | 4 → 4.1 → 4.1.1 |
| 21 | m | e5optm1 | m:91-205 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 22 | m | e5optm2 | m:6-90 | KH_2 | 327 → 327.11 → 327.11.1 |
| 23 | M | e5optM1 | M:2-143 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 24 | n | e5optn1 | n:7-99 | S10_plectin | 101 → 101.1 → 101.1.2 |
| 25 | o | e5opto1 | o:12-151 | Ribosomal_S19e | 101 → 101.1 → 101.1.2 |
| 26 | O | e5optO1 | O:1-190 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 27 | p | e5optp1 | p:5-314 | WD40 | 5 → 5.1 → 5.1.4 |
| 28 | P | e5optP1 | P:1-249 | Ribosomal_S6e | 239 → 239.1 → 239.1.1 |
| 29 | q | e5optq1 | q:20-57 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 30 | Q | e5optQ1 | Q:102-202 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 31 | Q | e5optQ2 | Q:3-110 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 32 | r | e5optr1 | r:10-149 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 33 | R | e5optR1 | R:2-82 | Ribosomal_S13_N | 101 → 101.40 → 101.40.1 |
| 34 | R | e5optR2 | R:83-142 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 35 | S | e5optS1 | S:5-86 | Ribosomal_S27e | 375 → 375.1 → 375.1.1 |
| 36 | t | e5optt1 | t:16-134 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 37 | T | e5optT1 | T:1-104 | Ribosomal_S26e | 377 → 377.1 → 377.1.1 |
| 38 | u | e5optu1 | u:8-78,u:99-127 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 39 | U | e5optU1 | U:45-112 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 40 | V | e5optV1 | V:9-143 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 41 | W | e5optW1 | W:116-238 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 42 | W | e5optW2 | W:22-115 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 43 | X | e5optX1 | X:11-158 | Ribosomal_S17,Ribosomal_S17_N | 2 → 2.1 → 2.1.1 |
| 44 | Y | e5optY1 | Y:4-126 | Ribosomal_S24e | 304 → 304.109 → 304.109.1 |
| 45 | Z | e5optZ1 | Z:2-116,Z:157-216 | Ribosomal_S8e | 3174 → 3174.1 → 3174.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors