ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5optb1 - ECOD Domain | ECOD

ECOD/Domains/e5optb1

e5optb1

UID: 002137342

PDB

Range: b:1-164
PDB: 5OPT chain b(all domains)
UniProt: Q4D4S1 (all domains)
Gene: Tc00.1047053504163.30

Molecule: Small ribosomal subunit protein uS4 (40S ribosomal protein S9)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S4,S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4,S4(221.1.2.1)

Pfam Families

PF00163Ribosomal_S4

Ribosomal protein S4/S9 N-terminal domain

ClanCL0492S4

S4 domain

ClanCL0492S4

External Links

ECOD PDB View: 5OPT RCSB PDB: 5OPT PDBe: 5OPT UniProt: Q4D4S1

Downloads

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