ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5optj1 - ECOD Domain | ECOD

ECOD/Domains/e5optj1

e5optj1

UID: 002137352

PDB

Range: j:86-149
PDB: 5OPT chain j(all domains)
UniProt: Q4D1T6 (all domains)
Gene: Tc00.1047053510409.39

Molecule: Ubiquitin-ribosomal protein eL40 fusion protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S27 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_S27(375.1.1.11)

Pfam Families

PF01599Ribosomal_S27

Ribosomal protein S27a

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5OPT RCSB PDB: 5OPT PDBe: 5OPT UniProt: Q4D1T6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure