ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5meyA1 - ECOD Domain | ECOD

ECOD/Domains/e5meyA1

e5meyA1

UID: 002146082

PDB

Range: A:15-138
PDB: 5MEY chain A(all domains)
UniProt: Q13485 (all domains)
Gene: SMAD4

Molecule: MH1 domain of human Smad4

3D Structure

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Related Domains

Browse other domains in MH1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyMH1(378.1.1.4)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Pfam Families

MH1 domain

ClanCL0263His-Me_finger

External Links

ECOD PDB View: 5MEY RCSB PDB: 5MEY PDBe: 5MEY UniProt: Q13485

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.