ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bk8T1 - ECOD Domain | ECOD

ECOD/Domains/e6bk8T1

e6bk8T1

UID: 002161613

PDB

Range: T:12-556
PDB: 6BK8 chain T(all domains)
UniProt: Q12309 (all domains)
Gene: CLF1

Molecule: Pre-mRNA-splicing factor CLF1 (Crooked neck-like factor 1) (PRP19-associated complex protein 77) (Synthetic lethal with CDC40 protein 3)

3D Structure

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Related Domains

Browse other domains in HAT, Suf, HAT_Syf1_CNRKL1_N, HAT_PRP39_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT, Suf, HAT_Syf1_CNRKL1_N, HAT_PRP39_N(109.4.1.3591)

Pfam Families

HAT (Half-A-TPR) repeat

ClanCL0020TPR

Suppressor of forked protein (Suf)

ClanCL0020TPR

PF23233HAT_Syf1_CNRKL1_N

Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

ClanCL0020TPR

PF23240HAT_PRP39_N

PRP39 N-terminal HAT repeat

External Links

ECOD PDB View: 6BK8 RCSB PDB: 6BK8 PDBe: 6BK8 UniProt: Q12309

Downloads

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TPR