PDB 6BK8
ELECTRON MICROSCOPY0 chains55 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
5 domainsChain bview chain
1 domainChain Bview chain
5 domainsChain cview chain
1 domainChain dview chain
1 domainChain Dview chain
1 domainChain fview chain
1 domainChain Fview chain
2 domainsChain gview chain
1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Iview chain
1 domainChain kview chain
1 domainChain Kview chain
1 domainChain lview chain
1 domainChain mview chain
1 domainChain Mview chain
1 domainChain nview chain
1 domainChain Nview chain
1 domainChain oview chain
1 domainChain Oview chain
2 domainsChain pview chain
1 domainChain Pview chain
4 domainsChain qview chain
1 domainChain rview chain
1 domainChain sview chain
1 domainChain Sview chain
2 domainsChain Tview chain
1 domainChain uview chain
2 domainsChain Uview chain
1 domainChain vview chain
2 domainsChain wview chain
2 domainsChain xview chain
2 domainsAll Domains (55)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e6bk8a1 | a:15-108 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | A | e6bk8A1 | A:126-884 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 3 | A | e6bk8A2 | A:885-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 4 | A | e6bk8A3 | A:1575-1577,A:1599-1828 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 5 | A | e6bk8A4 | A:1829-2106 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 6 | A | e6bk8A5 | A:1256-1574 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 7 | b | e6bk8b1 | b:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 8 | B | e6bk8B1 | B:102-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 9 | B | e6bk8B2 | B:440-510,B:530-589 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 10 | B | e6bk8B3 | B:859-975 | EFG_C | 304 → 304.24 → 304.24.1 |
| 11 | B | e6bk8B4 | B:590-674 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 12 | B | e6bk8B5 | B:675-858 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 13 | c | e6bk8c1 | c:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 14 | d | e6bk8d1 | d:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 15 | D | e6bk8D1 | D:93-451 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 16 | f | e6bk8f1 | f:4-53,f:77-102 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | F | e6bk8F1 | F:3-144 | STL11_N | 376 → 376.1 → 376.1.3 |
| 18 | F | e6bk8F2 | F:145-147,F:203-266 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 19 | g | e6bk8g1 | g:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 20 | G | e6bk8G1 | G:130-227 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 21 | G | e6bk8G2 | G:1-129 | Torus | 906 → 906.1 → 906.1.1 |
| 22 | h | e6bk8h1 | h:1-48,h:76-109 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | I | e6bk8I1 | I:2-157 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 24 | k | e6bk8k1 | k:4-53,k:77-100 | LSM | 4 → 4.1 → 4.1.1 |
| 25 | K | e6bk8K1 | K:2-28,K:58-115 | cwf21 | 6026 → 6026.1 → 6026.1.1 |
| 26 | l | e6bk8l1 | l:10-92 | LSM | 4 → 4.1 → 4.1.1 |
| 27 | L | e6bk8L1 | L:14-206,L:245-249 | 109.4.1.0 | 109 → 109.4 → 109.4.1 |
| 28 | L | e6bk8L2 | L:250-262,L:289-487 | MA3 | 109 → 109.4 → 109.4.1 |
| 29 | m | e6bk8m1 | m:12-83 | LSM | 4 → 4.1 → 4.1.1 |
| 30 | M | e6bk8M1 | M:74-75,M:153-455 | WD40 | 5 → 5.1 → 5.1.4 |
| 31 | n | e6bk8n1 | n:2-76 | LSM | 4 → 4.1 → 4.1.1 |
| 32 | N | e6bk8N1 | N:77-198,N:218-247 | Prp18 | 544 → 544.1 → 544.1.1 |
| 33 | o | e6bk8o1 | o:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 34 | O | e6bk8O1 | O:30-45,O:72-223 | PF30379 | 396 → 396.3 → 396.3.1 |
| 35 | O | e6bk8O2 | O:246-347 | Slu7 | 7101 → 7101.1 → 7101.1.1 |
| 36 | p | e6bk8p1 | p:1-48,p:76-106 | LSM | 4 → 4.1 → 4.1.1 |
| 37 | P | e6bk8P1 | P:834-1013 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 38 | P | e6bk8P2 | P:476-657 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 39 | P | e6bk8P3 | P:658-833 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 40 | P | e6bk8P4 | P:1014-1124 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 41 | q | e6bk8q1 | q:16-108 | LSM | 4 → 4.1 → 4.1.1 |
| 42 | r | e6bk8r1 | r:28-111 | RRM_5 | 304 → 304.9 → 304.9.1 |
| 43 | s | e6bk8s1 | s:1-167 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 44 | S | e6bk8S1 | S:13-58 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 45 | S | e6bk8S2 | S:62-109,S:230-252 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 46 | T | e6bk8T1 | T:12-556 | HAT, Suf, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 47 | u | e6bk8u1 | u:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 48 | u | e6bk8u2 | u:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 49 | U | e6bk8U1 | U:21-163,U:196-349,U:375-809 | HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N | 109 → 109.4 → 109.4.1 |
| 50 | v | e6bk8v1 | v:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 51 | v | e6bk8v2 | v:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 52 | w | e6bk8w1 | w:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 53 | w | e6bk8w2 | w:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
| 54 | x | e6bk8x1 | x:1-61 | U-box | 376 → 376.1 → 376.1.1 |
| 55 | x | e6bk8x2 | x:144-493 | 5.1.5.0 | 5 → 5.1 → 5.1.5 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors