ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ndj2I1 - ECOD Domain | ECOD

ECOD/Domains/e5ndj2I1

e5ndj2I1

UID: 002328456

PDB

Range: 2I:11-126
PDB: 5NDJ chain 2I(all domains)
UniProt: P80376 (all domains)
Gene: rpsK

Molecule: Small ribosomal subunit protein uS11 (30S ribosomal protein S11)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S11 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRibosomal_S11(2484.1.1.7)

Pfam Families

PF00411Ribosomal_S11

Ribosomal protein S11

ClanCL0267S11_L18p

External Links

ECOD PDB View: 5NDJ RCSB PDB: 5NDJ PDBe: 5NDJ UniProt: P80376

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure