ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wmpA2 - ECOD Domain | ECOD

ECOD/Domains/e5wmpA2

e5wmpA2

UID: 002336664

PDB

Range: A:182-276
PDB: 5WMP chain A(all domains)
UniProt: P01889 (all domains)
Gene: HLA-B

Molecule: HLA class I histocompatibility antigen, B-7 alpha chain

3D Structure

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Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal
Iodide ionIOD
within 5 Å only

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHER

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 5WMP RCSB PDB: 5WMP PDBe: 5WMP UniProt: P01889

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.