ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z5641 - ECOD Domain | ECOD

ECOD/Domains/e5z5641

e5z5641

UID: 002392471

PDB

Range: 4:12-89
PDB: 5Z56 chain 4(all domains)
UniProt: Q15427 (all domains)
Gene: SF3B4

Molecule: Splicing factor 3B subunit 4 (Pre-mRNA-splicing factor SF3b 49 kDa subunit) (Spliceosome-associated protein 49) (SAP 49)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 5Z56 RCSB PDB: 5Z56 PDBe: 5Z56 UniProt: Q15427

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