ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y88m1 - ECOD Domain | ECOD

ECOD/Domains/e5y88m1

e5y88m1

UID: 002407502

PDB

Range: m:1-48,m:76-109
PDB: 5Y88 chain m(all domains)
UniProt: Q02260 (all domains)
Gene: SMD1

Molecule: Small nuclear ribonucleoprotein Sm D1 (Sm-D1) (snRNP core protein D1)

3D Structure

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Related Domains

Browse other domains in LSM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyLSM(4.1.1.19)

Pfam Families

LSM domain

ClanCL0986Sm-like

External Links

ECOD PDB View: 5Y88 RCSB PDB: 5Y88 PDBe: 5Y88 UniProt: Q02260

Downloads

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