ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z5oB1 - ECOD Domain | ECOD

ECOD/Domains/e5z5oB1

e5z5oB1

UID: 002408300

PDB

Range: B:-3-73
PDB: 5Z5O chain B(all domains)
UniProt: P43235 (all domains)
Gene: CTSK

Molecule: Cathepsin K

3D Structure

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Related Domains

Browse other domains in Inhibitor_I29 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupPeptidase inhibitors family I29(3998)

HH-groupPeptidase inhibitors family I29(3998.1)

TT-groupPeptidase inhibitors family I29(3998.1.1)

FFamilyInhibitor_I29(3998.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 5 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol, Sulfate ion, …)

GlycerinGOL
DrugBank DB09462
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Sulfate ion

Pfam Families

PF08246Inhibitor_I29

Cathepsin propeptide inhibitor domain (I29)

External Links

ECOD PDB View: 5Z5O RCSB PDB: 5Z5O PDBe: 5Z5O UniProt: P43235

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.