ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6g88B1 - ECOD Domain | ECOD

ECOD/Domains/e6g88B1

e6g88B1

UID: 002476094

PDB

Range: B:38-160
PDB: 6G88 chain B(all domains)
UniProt: Q47759 (all domains)
Gene: pbp5

Molecule: Low affinity penicillin-binding protein 5 (PBP5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in MecA_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupNTF2-like(243.1)

TT-groupNTF2-like(243.1.1)

FFamilyMecA_N(243.1.1.7)

Pfam Families

NTF2-like N-terminal transpeptidase domain

ClanCL0051NTF2

External Links

ECOD PDB View: 6G88 RCSB PDB: 6G88 PDBe: 6G88 UniProt: Q47759

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure