ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6aaxC1 - ECOD Domain | ECOD

ECOD/Domains/e6aaxC1

e6aaxC1

UID: 002496355

PDB

Range: C:34-236
PDB: 6AAX chain C(all domains)
UniProt: Q8WVM0 (all domains)
Gene: TFB1M

Molecule: Dimethyladenosine transferase 1, mitochondrial

3D Structure

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Related Domains

Browse other domains in RrnaAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyRrnaAD(2003.1.5.2)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ribosomal RNA adenine dimethylase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6AAX RCSB PDB: 6AAX PDBe: 6AAX UniProt: Q8WVM0

Downloads

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