ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h2vB1 - ECOD Domain | ECOD

ECOD/Domains/e6h2vB1

e6h2vB1

UID: 002520613

PDB

Range: B:1-118
PDB: 6H2V chain B(all domains)
UniProt: Q9UI30 (all domains)
Gene: TRMT112

Molecule: Multifunctional methyltransferase subunit TRM112-like protein

3D Structure

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Related Domains

Browse other domains in Trm112p →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrm112p-like(4294)

HH-groupTrm112p-like(4294.1)

TT-groupTrm112p-like(4294.1.1)

FFamilyTrm112p(4294.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Sulfate ion, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF03966Trm112p

Trm112p-like protein

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 6H2V RCSB PDB: 6H2V PDBe: 6H2V UniProt: Q9UI30

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.