ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rxyCz1 - ECOD Domain | ECOD

ECOD/Domains/e6rxyCz1

e6rxyCz1

UID: 002523682

PDB

Range: Cz:1494-1768
PDB: 6RXY chain Cz(all domains)
UniProt: G0S6T5 (all domains)
Gene: CTHT_0026810

Molecule: rRNA biogenesis protein RRP5 (Ribosomal RNA-processing protein 5)

3D Structure

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Related Domains

Browse other domains in TPR_8, TPR_16, HAT_Syf1_CNRKL1_N, HAT_PRP39_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_8, TPR_16, HAT_Syf1_CNRKL1_N, HAT_PRP39_N(109.4.1.2441)

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

PF23233HAT_Syf1_CNRKL1_N

Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

ClanCL0020TPR

PF23240HAT_PRP39_N

PRP39 N-terminal HAT repeat

External Links

ECOD PDB View: 6RXY RCSB PDB: 6RXY PDBe: 6RXY UniProt: G0S6T5

Downloads

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TPR