ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3pifC8 - ECOD Domain | ECOD

ECOD/Domains/e3pifC8

e3pifC8

UID: 002529314

PDB

Range: C:250-380,C:504-673
PDB: 3PIF chain C(all domains)
UniProt: Q6CJ09 (all domains)
Gene: KLLA0_F22385g

Molecule: 5'-3' exoribonuclease 1 (EC 3.1.13.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in XRN_M →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHelical domain in 5'->3' exoribonucleases(3279)

HH-groupHelical domain in 5'->3' exoribonucleases(3279.1)

TT-groupHelical domain in 5'->3' exoribonucleases(3279.1.1)

FFamilyXRN_M(3279.1.1.1)

Pfam Families

Xrn1 helical domain

External Links

ECOD PDB View: 3PIF RCSB PDB: 3PIF PDBe: 3PIF UniProt: Q6CJ09

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure