PDB 3PIF
X-RAY DIFFRACTION2.90 Å0 chains28 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
All Domains (28)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e3pifA3 | A:915-1155 | XRN1_D2_D3 | 4 → 4.1 → 4.1.1 |
| 2 | A | e3pifA2 | A:381-462 | 320.5.1.0 | 320 → 320.5 → 320.5.1 |
| 3 | A | e3pifA4 | A:1156-1240 | SH3_12 | 4 → 4.1 → 4.1.1 |
| 4 | A | e3pifA5 | A:3-249 | XRN_N | 2006 → 2006.1 → 2006.1.4 |
| 5 | A | e3pifA6 | A:721-914 | XRN1_D1 | 4 → 4.1 → 4.1.1 |
| 6 | A | e3pifA7 | A:250-380,A:504-673 | XRN_M | 3279 → 3279.1 → 3279.1.1 |
| 7 | A | e3pifA8 | A:674-720 | 7102.1.1.0 | 7102 → 7102.1 → 7102.1.1 |
| 8 | B | e3pifB3 | B:915-1155 | XRN1_D2_D3 | 4 → 4.1 → 4.1.1 |
| 9 | B | e3pifB1 | B:381-462 | 320.5.1.0 | 320 → 320.5 → 320.5.1 |
| 10 | B | e3pifB2 | B:721-914 | XRN1_D1 | 4 → 4.1 → 4.1.1 |
| 11 | B | e3pifB4 | B:1156-1240 | SH3_12 | 4 → 4.1 → 4.1.1 |
| 12 | B | e3pifB6 | B:3-249 | XRN_N | 2006 → 2006.1 → 2006.1.4 |
| 13 | B | e3pifB7 | B:250-380,B:504-673 | XRN_M | 3279 → 3279.1 → 3279.1.1 |
| 14 | B | e3pifB8 | B:674-720 | 7102.1.1.0 | 7102 → 7102.1 → 7102.1.1 |
| 15 | C | e3pifC6 | C:915-1155 | XRN1_D2_D3 | 4 → 4.1 → 4.1.1 |
| 16 | C | e3pifC2 | C:1156-1240 | SH3_12 | 4 → 4.1 → 4.1.1 |
| 17 | C | e3pifC3 | C:381-462 | 320.5.1.0 | 320 → 320.5 → 320.5.1 |
| 18 | C | e3pifC5 | C:3-249 | XRN_N | 2006 → 2006.1 → 2006.1.4 |
| 19 | C | e3pifC7 | C:721-914 | XRN1_D1 | 4 → 4.1 → 4.1.1 |
| 20 | C | e3pifC8 | C:250-380,C:504-673 | XRN_M | 3279 → 3279.1 → 3279.1.1 |
| 21 | C | e3pifC9 | C:674-720 | 7102.1.1.0 | 7102 → 7102.1 → 7102.1.1 |
| 22 | D | e3pifD1 | D:3-249 | XRN_N | 2006 → 2006.1 → 2006.1.4 |
| 23 | D | e3pifD3 | D:721-914 | XRN1_D1 | 4 → 4.1 → 4.1.1 |
| 24 | D | e3pifD4 | D:915-981,D:1106-1155 | XRN1_D2_D3 | 4 → 4.1 → 4.1.1 |
| 25 | D | e3pifD5 | D:1156-1240 | SH3_12 | 4 → 4.1 → 4.1.1 |
| 26 | D | e3pifD6 | D:381-462 | 320.5.1.0 | 320 → 320.5 → 320.5.1 |
| 27 | D | e3pifD7 | D:250-380,D:504-673 | XRN_M | 3279 → 3279.1 → 3279.1.1 |
| 28 | D | e3pifD8 | D:674-720 | 7102.1.1.0 | 7102 → 7102.1 → 7102.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors