ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5qt2A3 - ECOD Domain | ECOD

ECOD/Domains/e5qt2A3

e5qt2A3

UID: 002533668

PDB

Range: A:347-400
PDB: 5QT2 chain A(all domains)
UniProt: Q15047 (all domains)
Gene: SETDB1

Molecule: Histone-lysine N-methyltransferase SETDB1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Tudor_4 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyTudor_4(4.1.1.128)

Ligands

in contact, ≤ 4 Å

2-[4-(1~{H}-pyrazol-3-yl)phenoxy]pyrimidineAW7
Unknown atom or ionUNX

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18358Tudor_4

Histone methyltransferase Tudor domain

ClanCL0010SH3

External Links

ECOD PDB View: 5QT2 RCSB PDB: 5QT2 PDBe: 5QT2 UniProt: Q15047

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure