ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6q3mD3 - ECOD Domain | ECOD

ECOD/Domains/e6q3mD3

e6q3mD3

UID: 002562057

PDB

Range: D:445-496
PDB: 6Q3M chain D(all domains)
UniProt: Q14839 (all domains)
Gene: CHD4

Molecule: Chromodomain-helicase-DNA-binding protein 4

3D Structure

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Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer.

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 6Q3M RCSB PDB: 6Q3M PDBe: 6Q3M UniProt: Q14839

Downloads

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Drug annotations from DrugDomain.