ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kpmA1 - ECOD Domain | ECOD

ECOD/Domains/e6kpmA1

e6kpmA1

UID: 002573733

PDB

Range: A:21-289
PDB: 6KPM chain A(all domains)
UniProt: G3JPF7 (all domains)
Gene: CCM_08020

Molecule: Chitinase

3D Structure

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Related Domains

Browse other domains in TIM-barrel_EndoS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTIM-barrel_EndoS(2002.1.1.238)

Ligands

in contact, ≤ 4 Å

alpha-L-fucoseFUC
drugDrugBank DB04473

+ 2 additives (Triethylene glycol, DI(HYDROXYETHYL)ETHER)

Triethylene glycolPGE
DrugBank DB02327

Pfam Families

PF23916TIM-barrel_EndoS

Endo-beta-N-acetylglucosaminidase EndoS TIM-barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6KPM RCSB PDB: 6KPM PDBe: 6KPM UniProt: G3JPF7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.