ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6w4xC1 - ECOD Domain | ECOD

ECOD/Domains/e6w4xC1

e6w4xC1

UID: 002605244

PDB

Range: C:1-375
PDB: 6W4X chain C(all domains)
UniProt: P69924 (all domains)
Gene: nrdB

Molecule: Ribonucleoside-diphosphate reductase 1 subunit beta

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_sm →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupFerritin/Heme oxygenase(150.1)

TT-groupHeme oxygenase/Ribonucleotide reductase(150.1.2)

FFamilyRibonuc_red_sm(150.1.2.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

+ 1 additive (Mu-oxo-diiron)

Mu-oxo-diironFEO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00268Ribonuc_red_sm

Ribonucleotide reductase, small chain

ClanCL0044Ferritin

External Links

ECOD PDB View: 6W4X RCSB PDB: 6W4X PDBe: 6W4X UniProt: P69924

Downloads

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