ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6li0A1 - ECOD Domain | ECOD

ECOD/Domains/e6li0A1

e6li0A1

UID: 002611114

PDB

Range: A:1003-1148
PDB: 6LI0 chain A(all domains)
UniProt: Q9Y2T5 (all domains)
Gene: GPR52

Molecule: Chimera of G-protein coupled receptor 52 and Flavodoxin

3D Structure

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Related Domains

Browse other domains in Flavodoxin_1, Flavodoxin_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupFlavoproteins/Phosphotyrosine protein phosphatases-like(2007.2)

TT-groupFlavoproteins(2007.2.1)

FFamilyFlavodoxin_1, Flavodoxin_5(2007.2.1.9)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

+ 2 additives (Citrate anion, DI(HYDROXYETHYL)ETHER)

Citrate anionFLC

Pfam Families

PF00258Flavodoxin_1

Flavodoxin

ClanCL0042Flavoprotein

PF12724Flavodoxin_5

Flavodoxin domain

ClanCL0042Flavoprotein

External Links

ECOD PDB View: 6LI0 RCSB PDB: 6LI0 PDBe: 6LI0 UniProt: Q9Y2T5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.