ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6tedE1 - ECOD Domain | ECOD

ECOD/Domains/e6tedE1

e6tedE1

UID: 002642593

PDB

Range: E:139-210
PDB: 6TED chain E(all domains)
UniProt: I3LSI7 (all domains)
Gene: POLR2E

Molecule: DNA-directed RNA polymerases I, II, and III subunit RPABC1 (DNA-directed RNA polymerase II subunit E) (RPB5 homolog)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb5_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRPB5-like RNA polymerase subunit(840)

HH-groupRPB5-like RNA polymerase subunit(840.1)

TT-groupRPB5-like RNA polymerase subunit(840.1.1)

FFamilyRNA_pol_Rpb5_C(840.1.1.1)

Pfam Families

PF01191RNA_pol_Rpb5_C

RNA polymerase Rpb5, C-terminal domain

External Links

ECOD PDB View: 6TED RCSB PDB: 6TED PDBe: 6TED UniProt: I3LSI7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure