ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qzdDDD1 - ECOD Domain | ECOD

ECOD/Domains/e6qzdDDD1

e6qzdDDD1

UID: 002647381

PDB

Range: DDD:82-182
PDB: 6QZD chain DDD(all domains)
UniProt: P01903 (all domains)
Gene: HLA-DRA

Molecule: HLA class II histocompatibility antigen, DR alpha chain

3D Structure

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Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Sulfate ion, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 6QZD RCSB PDB: 6QZD PDBe: 6QZD UniProt: P01903

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.