ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5qtaA1 - ECOD Domain | ECOD

ECOD/Domains/e5qtaA1

e5qtaA1

UID: 002669664

PDB

Range: A:1-363
PDB: 5QTA chain A(all domains)
UniProt: Q86C09 (all domains)

Molecule: Farnesyl pyrophosphate synthase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

1,3-dichloro-2-[(methylsulfonyl)methyl]benzenePJD

+ 2 additives (Dimethyl sulfoxide, DI(HYDROXYETHYL)ETHER)

Dimethyl sulfoxideDMS
DrugBank DB01093
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 5QTA RCSB PDB: 5QTA PDBe: 5QTA UniProt: Q86C09

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.