ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hmsB6 - ECOD Domain | ECOD

ECOD/Domains/e6hmsB6

e6hmsB6

UID: 002738825

PDB

Range: B:668-727
PDB: 6HMS chain B(all domains)
UniProt: Q9V2F4 (all domains)
Gene: polC

Molecule: DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) (Exodeoxyribonuclease large subunit) (EC 3.1.11.1) [Cleaved into: Pab polC intein (Pab pol II intein)]

3D Structure

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Related Domains

Browse other domains in PolC_DP2_central →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyPolC_DP2_central(375.1.1.204)

Pfam Families

PF24844PolC_DP2_central

DNA polymerase II large subunit DP2, central domain

External Links

ECOD PDB View: 6HMS RCSB PDB: 6HMS PDBe: 6HMS UniProt: Q9V2F4

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