ECODEvolutionary Classification of Protein Domains

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PDB 6HMS

ELECTRON MICROSCOPY0 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

2 domains

e6hmsA01(A:197-344)e6hmsA02(A:345-619)

Chain Bview chain

8 domains

e6hmsB1(B:4-283)e6hmsB2(B:782-997)e6hmsB3(B:309-445)e6hmsB4(B:538-653)e6hmsB5(B:451-537)e6hmsB6(B:668-727)e6hmsB7(B:728-781)e6hmsB8(B:1121-1172)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6hmsA01	A:197-344	tRNA_anti-codon	2 → 2.1 → 2.1.1
2	A	e6hmsA02	A:345-619	DNA_pol_E_B	246 → 246.2 → 246.2.1
3	B	e6hmsB1	B:4-283	PolC_DP2	3349 → 3349.1 → 3349.1.1
4	B	e6hmsB2	B:782-997	PolC_DP2_cat	1 → 1.1 → 1.1.2
5	B	e6hmsB3	B:309-445	PolC_DP2_central	1 → 1.3 → 1.3.1
6	B	e6hmsB4	B:538-653	242.4.1.0	242 → 242.4 → 242.4.1
7	B	e6hmsB5	B:451-537	101.45.1.0	101 → 101.45 → 101.45.1
8	B	e6hmsB6	B:668-727	PolC_DP2_central	375 → 375.1 → 375.1.1
9	B	e6hmsB7	B:728-781	375.1.1.0	375 → 375.1 → 375.1.1
10	B	e6hmsB8	B:1121-1172	zf-DPOE	375 → 375.10 → 375.10.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors