ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zooJ1 - ECOD Domain | ECOD

ECOD/Domains/e6zooJ1

e6zooJ1

UID: 002756164

PDB

Range: J:1-42
PDB: 6ZOO chain J(all domains)
UniProt: D5MAL3 (all domains)
Gene: psaJ

Molecule: Photosystem I reaction center subunit IX

3D Structure

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Related Domains

Browse other domains in PSI_PsaJ →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit IX of photosystem I reaction centre, PsaJ(5021)

HH-groupSubunit IX of photosystem I reaction centre, PsaJ(5021.1)

TT-groupSubunit IX of photosystem I reaction centre, PsaJ(5021.1.1)

FFamilyPSI_PsaJ(5021.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
Digalactosyl Diacyl Glycerol (Dgdg)

Pfam Families

PF01701PSI_PsaJ

Photosystem I reaction centre subunit IX / PsaJ

External Links

ECOD PDB View: 6ZOO RCSB PDB: 6ZOO PDBe: 6ZOO UniProt: D5MAL3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03426

(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOLLUT

drugDrugBank DB00137

PhylloquinonePQN

drugDrugBank DB01022

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Shown in the structure viewer. Drug annotations from DrugDomain.