ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ogjB1 - ECOD Domain | ECOD

ECOD/Domains/e7ogjB1

e7ogjB1

UID: 002766584

PDB

Range: B:9-234
PDB: 7OGJ chain B(all domains)

Molecule: tRNA (guanine-N(7)-)-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_4(2003.1.5.23)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 3 additives (Glycerin, Sulfate ion, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF02390Methyltransf_4

Putative methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7OGJ RCSB PDB: 7OGJ PDBe: 7OGJ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.