ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7mi2A1 - ECOD Domain | ECOD

ECOD/Domains/e7mi2A1

e7mi2A1

UID: 002770111

PDB

Range: A:406-476
PDB: 7MI2 chain A(all domains)

Molecule: Rpb7-binding protein seb1

3D Structure

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Related Domains

Browse other domains in RRM_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 7MI2 RCSB PDB: 7MI2 PDBe: 7MI2

Downloads

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