ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7s0zA2 - ECOD Domain | ECOD

ECOD/Domains/e7s0zA2

e7s0zA2

UID: 002785595

PDB

Range: A:1-91
PDB: 7S0Z chain A(all domains)

Molecule: Toxin B

3D Structure

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Related Domains

Browse other domains in TcdB_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupPMT helical bundle domain-like(633.16)

TT-groupPMT helical bundle domain-like(633.16.1)

FFamilyTcdB_N(633.16.1.2)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315within 5 Å only

+ 3 additives (Acetate ion, 1,2-ETHANEDIOL, Ammonium ion)

Acetate ionACT
1,2-ETHANEDIOLEDO

Pfam Families

TcdB toxin N-terminal helical domain

External Links

ECOD PDB View: 7S0Z RCSB PDB: 7S0Z PDBe: 7S0Z

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Ammonium ionNH4

Shown in the structure viewer. Drug annotations from DrugDomain.