ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7aagC1 - ECOD Domain | ECOD

ECOD/Domains/e7aagC1

e7aagC1

UID: 002791133

PDB

Range: C:88-409
PDB: 7AAG chain C(all domains)

Molecule: cAMP-specific 3',5'-cyclic phosphodiesterase 4D

3D Structure

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Related Domains

Browse other domains in PDEase_I →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupHD-domain/PDEase-like(131.1)

TT-groupHD-domain/PDEase-like(131.1.1)

FFamilyPDEase_I(131.1.1.1)

Ligands

in contact, ≤ 4 Å

IsoleucineILE
drugDrugBank DB00167
ProlinePRO
drugDrugBank DB00172
Magnesium ion

Pfam Families

PF00233PDEase_I

3'5'-cyclic nucleotide phosphodiesterase

ClanCL0237HD_PDEase

External Links

ECOD PDB View: 7AAG RCSB PDB: 7AAG PDBe: 7AAG

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

1-cycloheptyl-3-(4-methoxy-3-{4-[4-(1H-1,2,3,4-tetrazol-5-yl)phenoxy]butoxy}phenyl)-4,4-dimethyl-4,5-dihydro-1H-pyrazol-5-oneQWT

Zinc ionZN

metal

+ 4 additives (Dimethyl sulfoxide, HEPES, 1,2-ETHANEDIOL, …)

Dimethyl sulfoxideDMS
DrugBank DB01093
HEPESEPE
DrugBank DB16872
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.