ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7b2iC1 - ECOD Domain | ECOD

ECOD/Domains/e7b2iC1

e7b2iC1

UID: 002792233

PDB

Range: C:12-402
PDB: 7B2I chain C(all domains)

Molecule: Queuine tRNA-ribosyltransferase catalytic subunit 1

3D Structure

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Related Domains

Browse other domains in TGT →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTGT(2002.1.1.73)

Ligands

in contact, ≤ 4 Å

Hexaethylene glycolP6G
Zinc ionZN
metal

+ 5 additives (Citric acid, Triethylene glycol, Sulfate ion, …)

Citric acidCIT

Pfam Families

Queuine tRNA-ribosyltransferase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 7B2I RCSB PDB: 7B2I PDBe: 7B2I

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB04272

Triethylene glycolPGE

DrugBank DB02327

Sulfate ionSO4

DrugBank DB14546

DI(HYDROXYETHYL)ETHERPEG

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.