ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7kb6B1 - ECOD Domain | ECOD

ECOD/Domains/e7kb6B1

e7kb6B1

UID: 002796224

PDB

Range: B:68-117
PDB: 7KB6 chain B(all domains)

Molecule: Glucosidase 2 subunit beta

3D Structure

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Related Domains

Browse other domains in PRKCSH-like →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupLDL receptor-like module(389.3)

TT-groupLDL receptor-like module(389.3.1)

FFamilyPRKCSH-like(389.3.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 4 additives (Sulfate ion, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, …)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PF12999PRKCSH-like

Glucosidase II beta subunit-like

External Links

ECOD PDB View: 7KB6 RCSB PDB: 7KB6 PDBe: 7KB6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.